Sep 28, 2011

seqMINER: good tool for ChIP-seq data visualization

A java tool that runs in Win/Linux/MacOSX that lets you upload alignments from chIP-seq datasets to view profiles around TSS or chosen genome co-ordinates:

Paper: http://www.ncbi.nlm.nih.gov/pubmed/21177645?dopt=Abstract

Software: http://bips.u-strasbg.fr/seqminer/tiki-index.php

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